HS3F+HEXOS 

WORKSHOP ON THE LINE ANALYSIS

25-28 May at CESR, Toulouse (France)

- GOAL of the workshop: to make the point and get familiar with the existing tools and databases for the identification of lines in the sub-millimeter/far-infraredspectral range. The workshop will have a few general presentations followed by hands-on sessions with practical exmples. Two tools will be specifically used: CASSIS (developed at CESR) and XCLASS (developed at Bonn/Koln). In order to be efficient, partecipants are suggested/requested to download these packages before the workshop. Links to the web sites for the downloads will be soon posted here.

- PROGRAM

- DOWNLOAD PACKAGES

- LOCATION:

CNRS Délégation Midi-Pyrénées

16 avenue Edouard Belin

Salle de la Rotonde, Toulouse.

Here you find  how to get to workshop site .

Here you find a list of suggested hotels in Toulouse and how to get from the airport to your hotel .

Here you find the list of participants : please check that you are in the list!

SOC: T.Bergin, C.Ceccarelli, E.Caux, P.Schilke

LOC: E.Caux, C.Vastel 

For logistic informationd and help, please contact This e-mail address is being protected from spam bots, you need JavaScript enabled to view it This e-mail address is being protected from spam bots, you need JavaScript enabled to view it . For other questions, please contact This e-mail address is being protected from spam bots, you need JavaScript enabled to view it This e-mail address is being protected from spam bots, you need JavaScript enabled to view it . 

PROGRAM

START: 11:00am

Monday, 25th:
Session 1: General information
Status of HIFI, with focus on the spectral survey capabilities (E.Caux)
Intro HEXOS + HS3F spectral surveys (EB+CC)

Session 2: Available tools for the data reduction and basic modeling of multi-frequency line data
Introduction to the HIPE pipeline (A.Boogert)
Sideband deconvolution with HIPE (S.Lord)
Sideband deconvolution with CLASS (P.Hily-Blant)
Introduction to CASSIS (E.Caux)
Introduction to XCLASS (P.Schilke)

Session 3: Hands on CASSIS: LTE modeling
Software installation and testing

Tuesday, 26th:
Session 3: Hands on CASSIS: LTE modeling
Split and work on line survey examples

Wensday, 27th:
Session 4: Spectroscopic and molecular databases
Status of the art of the work on molecular spectroscopy (weeds and flowers) (A.Walters)
Status of the available spectroscopy databases: CDMS+JPL + other labs work (J.Pearson)
Status of the art of the work on collisional coefficients (L.Wiesenfeld)
Status of the available molecular coefficients databases (F.van der Tak)

Session 5: Hands on XCLASS: LTE modeling
Software installation and testing
Split and work on line survey examples

Thursday, 28th:
Session 5: Hands on XCLASS: LTE modeling
Split and work on line survey examples

Session 6: Wrap-up on CASSIS and XCLASS LTE modeling
Report on problems/remarks etc

END: 05:00pm 

Installation of MySQL and the CASSIS Database
I. Conventions :
• YOUR_MYSQL_DIRECTORY : usually “/usr/local/mysql/bin" on Linux and Mac installation.
• YOUR_CASSIS_DATABASE_DIRECTORY : the directory where cassis-database-2.0.tar.gz was unzipped.

II. Installation of MySQL
II.a Download and install MySql if not yet installed on your computer :
• CASSIS requires Version 5.x of MySQL (Not working with version 4.x)
• We recommend version 5.1
• We have experienced some problems with the beta version 6.0
Choose the package that corresponds to your operating system at the bottom of this link (read II.b Notes before !):
• http://dev.mysql.com/downloads/mysql/5.1.html
Install all packages present in the installation package corresponding to your operating system, and make sure MySQL server is running before continuing CASSIS
installation.
II.b Notes :
• on Mac : It's recommended (really !) to download the mysql package format (not TAR parckages). Don't forget to reboot your mac to be sure that the
server is running. Please refer to readme file on mysql package format file for more details.
• on Ubuntu : We recommend to get MySQL, via the apt-get tool. Simply running “sudo apt-get install mysql-server” will get you MySQL 5.1.
• on Red Hat : You can download the Red Hat Package manager ou RPM

III. Download the CASSIS Database
http://cassis.cesr.fr/download/cassis-database-2.0.tar.gz

IV. Installation of the CASSIS database :
This should be done from a terminal/X11 window

IV.a If you have an old CASSIS database installed, drop it out :
• cd YOUR_MYSQL_DIRECTORY
• ./mysql -u root mysql
• mysql> DROP DATABASE cassis;
• mysql> exit
IV.b Create Cassis database on MySql, Cassis user and set privileges :
• cd YOUR_MYSQL_DIRECTORY
• ./mysql -u root mysql
• mysql> CREATE DATABASE cassis;
• mysql> GRANT ALL PRIVILEGES ON cassis.* TO 'cassis'@'localhost';
• mysql> FLUSH PRIVILEGES;
• mysql> exit
IV.c Notes :
• Copying/pasting the mysql commands above if the safest
• From Ubuntu 7.10, the mysql directory is automatically in the global path, you can just enter "mysql -u root mysql"
• For some mysql versions/platforms you could have to define a user named "cassis" before the command "grant all..."
• For some platforms you have to remove @'localhost' in the command "grant all..."
• For some platforms you have to replace localhost by localhost.localdomain.
 
IV.d Fill your CASSIS database
• cd YOUR_CASSIS_DATABASE_DIRECTORY
• YOUR_MYSQL_DIRECTORY/mysql -u cassis cassis < cassis-database-2.0.sql
!!!!!! Warning, this operation takes time, there are 5701457 transitions in the database : up to 1 hour on slow computers
V. Check everything went OK :
• cd YOUR_MYSQL_DIRECTORY
• ./mysql -u root cassis cassis
• mysql> select count(*) from transitions;
The result should be : 5701457
If you encounter any problem, please contact the CASSIS Project Manager, Jean-Michel Glorian :  This e-mail address is being protected from spam bots, you need JavaScript enabled to view it

IMPORTANT NOTE: For those who have already make templates in the old version of CASSIS, do not forget to export all these templates before dropping the old CASSIS database or they will be lost. Although the database structure has changed and you'll need to make some corrections on these templates, this will take less time exporting them before.

  List of Hotels in Toulouse

Hotel Albert 1er, http://www.hotel.albert1.com, (33) 561 211 791
This one is just in the heart of the city and is the best choice in Toulouse for BestAdvisor
It is 200 m away from a subway station that goes to CESR.
The prices range from 79 to 119 euros, depending on the room you choose and the date (cheaper on sunday night, more expensive and may be already fully booked on Saturday night)

Hotel Riquet, http://www.hotelriquet.com, (33) 561 625 596
This one is 500 m from the heart of the city and is a very good choice in Toulouse from guests that used it
It is also 500 m away from a subway station that goes to CESR.
The prices range from 54 to 90 euros, depending on the room you choose, but you have to say you are going to a workshop organized by CNRS to have these prices.